Transcript: ENST00000309957.2 CARKD-001

Description

carbohydrate kinase domain containing [Source:HGNC Symbol;Acc:25576]

Gene Synonyms

FLJ10769, LP3298

Location

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 11856 variant alleles and maps to 602 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309957.2	CARKD-001	2659	390aa	ENSP00000311984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9513	Q8IW45	NM_018210.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458711.2	CARKD-203	1330	216aa	ENSP00000412789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQR1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397191.4	CARKD-201	1309	121aa	ENSP00000380375.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3Q0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424185.2	CARKD-202	1308	237aa	ENSP00000413191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55903	Q8IW45	NM_001242883.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470164.2	CARKD-003	2377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,659 bps, Translation length: 390 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IW45

CCDS

This transcript is a member of the Human CCDS set: CCDS9513

Version

ENST00000309957.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045764 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.