Transcript: ENST00000265333.3 VDAC1-002

Description

voltage-dependent anion channel 1 [Source:HGNC Symbol;Acc:12669]

Gene Synonyms

MGC111064, PORIN, VDAC, VDAC-1

Location

Chromosome 5: 133,307,606-133,340,824 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 14133 variant alleles and maps to 605 oligo probes.

Gene

This transcript is a product of gene ENSG00000213585.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265333.3	VDAC1-002	1953	283aa	ENSP00000265333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	NM_003374.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395047.2	VDAC1-001	1873	283aa	ENSP00000378487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395044.3	VDAC1-003	1807	283aa	ENSP00000378484.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425992.1	VDAC1-004	704	184aa	ENSP00000390129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JI87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466080.1	VDAC1-005	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492324.1	VDAC1-006	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489906.1	VDAC1-007	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,953 bps, Translation length: 283 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21796

CCDS

This transcript is a member of the Human CCDS set: CCDS4168

Version

ENST00000265333.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259208 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265333.3 VDAC1-002

Summary