Transcript: ENST00000558516.1 CSH2-006

Description

chorionic somatomammotropin hormone 2 [Source:HGNC Symbol;Acc:2441]

Gene Synonyms

CS-1, CS-2, CSA, CSB, CSMT, PL, hCS-1, hCS-A, hCS-B

Location

Chromosome 17: 61,949,407-61,951,067 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1275 variant alleles and maps to 1443 oligo probes.

Gene

This transcript is a product of gene ENSG00000213218.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336844.5	CSH2-004	1173	167aa	ENSP00000338816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11646	A6NIT4	NM_022644.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392886.2	CSH2-001	920	217aa	ENSP00000376623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42369	P01243 P78451 Q7KZ35	NM_020991.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560142.1	CSH2-002	749	160aa	ENSP00000453452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM39 Q7KZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345366.7	CSH2-201	599	122aa	ENSP00000308396.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42368	B1A4H9 Q7KZ35	NM_022645.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559928.1	CSH2-005	1660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558516.1	CSH2-006	1172	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,172 bps,

Version

ENST00000558516.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417661 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558516.1 CSH2-006

Summary