Transcript: ENST00000490540.1 ASIC3-007

Description

acid-sensing (proton-gated) ion channel 3 [Source:HGNC Symbol;Acc:101]

Gene Synonyms

ACCN3, DRASIC, SLNAC1, TNAC1, TNaC1

Location

Chromosome 7: 150,748,300-150,749,843 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 1102 variant alleles and maps to 241 oligo probes.

Gene

This transcript is a product of gene ENSG00000213199.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357922.4	ASIC3-001	2232	543aa	ENSP00000350600.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5914	Q9UHC3	NM_020322.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349064.5	ASIC3-003	1895	531aa	ENSP00000344838.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5916	Q9UHC3	NM_020321.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297512.8	ASIC3-005	1718	549aa	ENSP00000297512.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5915	Q9UHC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490540.1	ASIC3-007	520	149aa	ENSP00000418361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4W0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485929.1	ASIC3-009	502	144aa	ENSP00000420371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000377904.4	ASIC3-002	2096	407aa	ENSP00000367136.4	Nonsense mediated decay		Q9UHC3	-	-
ENST00000468325.1	ASIC3-004	1668	407aa	ENSP00000418605.1	Nonsense mediated decay		Q9UHC3	-	-
ENST00000498105.1	ASIC3-008	825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474135.1	ASIC3-006	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 520 bps, Translation length: 149 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000490540.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351729 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000490540.1 ASIC3-007

Summary