Transcript: ENST00000592543.1 DENND1C-011

Description

DENN/MADD domain containing 1C [Source:HGNC Symbol;Acc:26225]

Gene Synonyms

FAM31C, FLJ22757

Location

Chromosome 19: 6,476,505-6,481,785 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 3262 variant alleles and maps to 245 oligo probes.

Gene

This transcript is a product of gene ENSG00000205744.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381480.2	DENND1C-001	2816	801aa	ENSP00000370889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45938	B3KP66 K7EKL5 K7EM80 K7EMN9 K7ENM0 Q8IV53	NM_024898.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543576.1	DENND1C-014	2395	757aa	ENSP00000437805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KP66 K7EKL5 K7EM80 K7EMN9 K7ENM0 Q8IV53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590173.1	DENND1C-003	582	141aa	ENSP00000467008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM80 K7EMN9 K7ENM0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590473.1	DENND1C-012	571	127aa	ENSP00000466583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM80 K7EMN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588421.1	DENND1C-005	484	88aa	ENSP00000466394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM80	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590867.1	DENND1C-002	2933	215aa	ENSP00000465675.1	Nonsense mediated decay		K7EKL5 K7EM80 K7EMN9 K7ENM0	-	-
ENST00000586046.1	DENND1C-015	590	90aa	ENSP00000466334.1	Nonsense mediated decay		K7EM30	-	-
ENST00000591030.1	DENND1C-004	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590444.1	DENND1C-009	2446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590818.1	DENND1C-010	2422	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592543.1	DENND1C-011	1057	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591795.1	DENND1C-013	860	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589491.1	DENND1C-007	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588988.1	DENND1C-008	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,057 bps,

Version

ENST00000592543.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453450 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000592543.1 DENND1C-011

Summary