Transcript: ENST00000566368.1 E2F4-012

Description

E2F transcription factor 4, p107/p130-binding [Source:HGNC Symbol;Acc:3118]

Gene Synonyms

E2F-4

Location

Chromosome 16: 67,226,430-67,226,963 forward strand.

About this transcript

This transcript has 2 exons, is associated with 291 variant alleles and maps to 109 oligo probes.

Gene

This transcript is a product of gene ENSG00000205250.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379378.3	E2F4-001	2096	413aa	ENSP00000368686.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32464	Q16254	NM_001950.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565226.1	E2F4-005	446	144aa	ENSP00000458706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568839.1	E2F4-006	944	145aa	ENSP00000458082.1	Nonsense mediated decay		H3BVE4	-	-
ENST00000569573.1	E2F4-008	849	121aa	ENSP00000457239.1	Nonsense mediated decay		H3BTM3	-	-
ENST00000565849.1	E2F4-010	639	81aa	ENSP00000454477.1	Nonsense mediated decay		H3BMP3	-	-
ENST00000564718.1	E2F4-011	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567007.1	E2F4-002	2615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561904.1	E2F4-013	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567228.1	E2F4-004	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563238.1	E2F4-007	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568485.1	E2F4-009	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568693.1	E2F4-003	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566368.1	E2F4-012	438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 438 bps,

Version

ENST00000566368.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421574 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000566368.1 E2F4-012

Summary