Transcript: ENST00000260908.7 SLFN12L-004

Description

schlafen family member 12-like [Source:HGNC Symbol;Acc:33920]

Gene Synonyms

SLFN5

Location

Chromosome 17: 33,800,708-33,814,876 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 6805 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSG00000205045.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260908.7	SLFN12L-004	3119	588aa	ENSP00000437635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56026	F5H6G3	NM_001195790.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361112.4	SLFN12L-005	2752	617aa	ENSP00000354412.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6IEE8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449046.1	SLFN12L-201	1876	619aa	ENSP00000389348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6G3 J3KQ81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587436.1	SLFN12L-008	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590802.1	SLFN12L-007	477	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,119 bps, Translation length: 588 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS56026

Version

ENST00000260908.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395748 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000260908.7 SLFN12L-004

Summary