Transcript: ENST00000259003.10 CSHL1-002

Description

chorionic somatomammotropin hormone-like 1 [Source:HGNC Symbol;Acc:2442]

Gene Synonyms

CS-5, CSHP1, CSL, MGC149868, hCS-L

Location

Chromosome 17: 61,986,960-61,988,701 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 1661 variant alleles and maps to 988 oligo probes.

Gene

This transcript is a product of gene ENSG00000204414.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392824.4	CSHL1-201	1022	173aa	ENSP00000376569.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QT06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450719.3	CSHL1-006	973	167aa	ENSP00000413501.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3R7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561003.1	CSHL1-003	880	178aa	ENSP00000452900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKQ4 H7C3R7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000259003.10	CSHL1-002	739	160aa	ENSP00000259003.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I6L999	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309894.5	CSHL1-009	669	222aa	ENSP00000309524.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11652	I6L999 Q14406	NM_022579.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346606.6	CSHL1-001	659	128aa	ENSP00000316360.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42370	I6L999 Q14406	NM_001318.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438387.2	CSHL1-008	566	139aa	ENSP00000402632.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45759	I6L999 Q14406	NM_022581.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558099.1	CSHL1-004	1590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560999.1	CSHL1-007	1602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558609.1	CSHL1-005	1081	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 739 bps, Translation length: 160 residues

Version

ENST00000259003.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417702 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000259003.10 CSHL1-002

Summary