Transcript: ENST00000416015.1 MBD5-005

Description

methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:20444]

Gene Synonyms

CDC37, FLJ11113, KIAA1461, MRD1

Location

Chromosome 2: 149,226,294-149,275,805 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 19726 variant alleles and maps to 416 oligo probes.

Gene

This transcript is a product of gene ENSG00000204406.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000416015.1	MBD5-005	8489	1064aa	ENSP00000393168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407073.1	MBD5-001	5992	1494aa	ENSP00000386049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33302	Q9P267	NM_018328.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404807.1	MBD5-004	5823	1727aa	ENSP00000384672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHH0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478804.1	MBD5-002	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488372.1	MBD5-007	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496158.1	MBD5-006	544	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478190.1	MBD5-010	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473478.1	MBD5-008	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470063.1	MBD5-011	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469438.1	MBD5-009	252	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496893.1	MBD5-003	2802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 8,489 bps, Translation length: 1,064 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000416015.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318115 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000416015.1 MBD5-005

Summary