Transcript: ENST00000371362.3 LDLRAD1-002

Description

low density lipoprotein receptor class A domain containing 1 [Source:HGNC Symbol;Acc:32069]

Location

Chromosome 1: 54,474,412-54,483,845 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 4390 variant alleles and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSG00000203985.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371360.1	LDLRAD1-001	785	205aa	ENSP00000360411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30725	Q5T700	NM_001010978.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371362.3	LDLRAD1-002	654	116aa	ENSP00000360413.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60145	Q5T700	NM_001276394.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545928.1	LDLRAD1-202	593	162aa	ENSP00000445871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60146	B7ZME3	NM_001276393.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420619.1	LDLRAD1-201	546	166aa	ENSP00000411017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60147	Q5T700	NM_001276392.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 654 bps, Translation length: 116 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T700

CCDS

This transcript is a member of the Human CCDS set: CCDS60145

Version

ENST00000371362.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000023244 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371362.3 LDLRAD1-002

Summary