Transcript: ENST00000492601.2 SGMS1-004

Description

sphingomyelin synthase 1 [Source:HGNC Symbol;Acc:29799]

Gene Synonyms

MGC17342, MOB, MOB1, SMS1, TMEM23, hmob33

Location

Chromosome 10: 52,103,896-52,178,238 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 30393 variant alleles and maps to 61 oligo probes.

Gene

This transcript is a product of gene ENSG00000198964.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361781.2	SGMS1-003	3744	413aa	ENSP00000354829.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7240	D3DWC4 E6ZCI7 R4GNI5	NM_147156.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602565.2	SGMS1-002	1333	12aa	ENSP00000475427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000361543.2	SGMS1-201	1013	241aa	ENSP00000355235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C0MHM2 Q86VZ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429490.1	SGMS1-202	735	244aa	ENSP00000406795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJU2 R4GNI5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602619.1	SGMS1-005	461	35aa	ENSP00000473668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GNI5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492601.2	SGMS1-004	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609445.1	SGMS1-007	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000608287.1	SGMS1-006	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498514.1	SGMS1-001	397	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 625 bps,

Version

ENST00000492601.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467777 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000492601.2 SGMS1-004

Summary