Transcript: ENST00000583529.1 ARHGEF15-005

Description

Rho guanine nucleotide exchange factor (GEF) 15 [Source:HGNC Symbol;Acc:15590]

Gene Synonyms

ARGEF15, E5, Ephexin5, FLJ13791, KIAA0915, MGC44868, Vsm-RhoGEF

Location

Chromosome 17: 8,213,559-8,215,706 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1114 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000198844.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361926.3	ARHGEF15-001	4154	841aa	ENSP00000355026.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11139	J3KT46 J3QS60 O94989	NM_173728.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421050.1	ARHGEF15-201	4094	841aa	ENSP00000412505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11139	J3KT46 J3QS60 O94989	NM_025014.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579439.1	ARHGEF15-004	714	207aa	ENSP00000464540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT46 J3QS60	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000583529.1	ARHGEF15-005	537	116aa	ENSP00000462796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581809.1	ARHGEF15-006	668	91aa	ENSP00000463875.1	Nonsense mediated decay		J3QQS4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582060.1	ARHGEF15-008	248	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000455564.3	ARHGEF15-002	2105	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578286.1	ARHGEF15-007	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 537 bps, Translation length: 116 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000583529.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442308 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000583529.1 ARHGEF15-005

Summary