Transcript: ENST00000370225.3 ABCA4-001

Description

ATP-binding cassette, sub-family A (ABC1), member 4 [Source:HGNC Symbol;Acc:34]

Gene Synonyms

ABC10, ABCR, ARMD2, CORD3, FFM, RMP, RP19, STGD, STGD1

Location

Chromosome 1: 94,458,393-94,586,688 reverse strand.

About this transcript

This transcript has 50 exons, is annotated with 36 domains and features, is associated with 58125 variant alleles and maps to 1325 oligo probes.

Gene

This transcript is a product of gene ENSG00000198691.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370225.3	ABCA4-001	7309	2273aa	ENSP00000359245.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS747	F5H5R2 P78363 Q0QD48 Q86V62	NM_000350.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535735.1	ABCA4-201	3105	979aa	ENSP00000437682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6E5 Q0QD48 Q86V62	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536513.1	ABCA4-203	1780	543aa	ENSP00000439707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWY6 F5H5R2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535881.1	ABCA4-202	1459	392aa	ENSP00000443203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5R2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465352.1	ABCA4-002	1048	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460514.1	ABCA4-004	690	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470771.1	ABCA4-005	488	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472033.1	ABCA4-003	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484388.1	ABCA4-006	327	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 50, Coding exons: 50, Transcript length: 7,309 bps, Translation length: 2,273 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78363

CCDS

This transcript is a member of the Human CCDS set: CCDS747

Version

ENST00000370225.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029320 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000370225.3 ABCA4-001

Summary