Transcript: ENST00000547101.1 IRAK4-004

Description

interleukin-1 receptor-associated kinase 4 [Source:HGNC Symbol;Acc:17967]

Gene Synonyms

IPD1, IRAK-4, NY-REN-64, REN64

Location

Chromosome 12: 44,152,764-44,180,706 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 4 domains and features, is associated with 11297 variant alleles and maps to 476 oligo probes.

Gene

This transcript is a product of gene ENSG00000198001.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000431837.1	IRAK4-201	4147	336aa	ENSP00000390327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44862	Q9NWZ3	NM_001145257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448290.2	IRAK4-001	2835	460aa	ENSP00000390651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8744	F8VR40 F8VW24 Q69FE3 Q9NWZ3	NM_016123.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551736.1	IRAK4-002	1684	460aa	ENSP00000446490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8744	F8VR40 F8VW24 Q69FE3 Q9NWZ3	NM_001114182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440781.2	IRAK4-005	1409	336aa	ENSP00000408734.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44862	Q9NWZ3	NM_001145258.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550616.1	IRAK4-011	547	89aa	ENSP00000446571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR40 F8VW24	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547521.1	IRAK4-007	1757	60aa	ENSP00000449693.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000550386.1	IRAK4-003	1751	54aa	ENSP00000449848.1	Nonsense mediated decay		F8VW24	-	-
ENST00000547101.1	IRAK4-004	1703	54aa	ENSP00000449317.1	Nonsense mediated decay		F8VW24	-	-
ENST00000550615.1	IRAK4-006	1348	60aa	ENSP00000449553.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000552309.1	IRAK4-010	1000	60aa	ENSP00000448197.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000550361.1	IRAK4-008	563	60aa	ENSP00000449859.1	Nonsense mediated decay		F8VVZ1 F8VW24	-	-
ENST00000547928.1	IRAK4-012	626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546780.1	IRAK4-009	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 2, Transcript length: 1,703 bps, Translation length: 54 residues

Version

ENST00000547101.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403950 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000547101.1 IRAK4-004

Summary