Transcript: ENST00000538151.1 OCLN-202

Description

occludin [Source:HGNC Symbol;Acc:8104]

Gene Synonyms

BLCPMG

Location

Chromosome 5: 68,800,028-68,849,539 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 17683 variant alleles and maps to 342 oligo probes.

Gene

This transcript is a product of gene ENSG00000197822.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355237.2	OCLN-001	6438	522aa	ENSP00000347379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_002538.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380766.2	OCLN-201	2218	468aa	ENSP00000370143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396442.2	OCLN-002	1748	522aa	ENSP00000379719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_001205254.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538151.1	OCLN-202	975	271aa	ENSP00000445940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54864	Q16625	NM_001205255.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542132.1	OCLN-203	813	200aa	ENSP00000440000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514370.1	OCLN-003	958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510666.1	OCLN-004	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 975 bps, Translation length: 271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16625

CCDS

This transcript is a member of the Human CCDS set: CCDS54864

Version

ENST00000538151.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000538151.1 OCLN-202

Summary