Transcript: ENST00000546268.1 SIGLEC15-002

Description

sialic acid binding Ig-like lectin 15 [Source:HGNC Symbol;Acc:27596]

Gene Synonyms

CD33L3, HsT1361, SIGLEC-15

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 5822 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389474.3	SIGLEC15-001	1573	328aa	ENSP00000374125.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32819	Q6ZMC9	NM_213602.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546268.1	SIGLEC15-002	1054	174aa	ENSP00000443509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DVQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587418.1	SIGLEC15-004	674	105aa	ENSP00000466774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EN40	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602118.2	SIGLEC15-006	1016	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593178.2	SIGLEC15-003	2580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,054 bps, Translation length: 174 residues

Version

ENST00000546268.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000445056 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.