Transcript: ENST00000468384.1 HMGB1-007

Description

high mobility group box 1 [Source:HGNC Symbol;Acc:4983]

Gene Synonyms

DKFZp686A04236, HMG1, HMG3, SBP-1

Location

Chromosome 13: 31,037,448-31,040,051 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2260 variant alleles and maps to 409 oligo probes.

Gene

This transcript is a product of gene ENSG00000189403.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405805.1	HMGB1-012	4199	215aa	ENSP00000384678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9335	P09429 Q5T7C0 Q9NYD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341423.5	HMGB1-004	2339	215aa	ENSP00000345347.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9335	P09429 Q5T7C0 Q9NYD7	NM_002128.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339872.4	HMGB1-001	2319	215aa	ENSP00000343040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9335	P09429 Q5T7C0 Q9NYD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399489.1	HMGB1-009	1727	158aa	ENSP00000382412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7C0 Q5T7C4 Q9NYD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399494.1	HMGB1-011	1282	215aa	ENSP00000382417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9335	P09429 Q5T7C0 Q9NYD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326004.4	HMGB1-003	821	158aa	ENSP00000369904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7C0 Q5T7C4 Q9NYD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398908.3	HMGB1-005	454	97aa	ENSP00000410465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7C0 Q9NYD7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468384.1	HMGB1-007	503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490788.1	HMGB1-008	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 503 bps,

Version

ENST00000468384.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000044362 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000468384.1 HMGB1-007

Summary