Transcript: ENST00000486524.1 SLX4-002

Description

SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:23845]

Gene Synonyms

BTBD12, FANCP, KIAA1784, KIAA1987, MUS312

Location

About this transcript

This transcript has 4 exons, is associated with 6000 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294008.3	SLX4-001	7307	1834aa	ENSP00000294008.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10506	Q8IY92	NM_032444.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466154.1	SLX4-003	3228	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486524.1	SLX4-002	3075	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,075 bps,

Version

ENST00000486524.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157302 (version 1)

Annotation Attributes

retained intron CDS [Definitions]