Transcript: ENST00000375167.1 H2AFX-002

Description

H2A histone family, member X [Source:HGNC Symbol;Acc:4739]

Gene Synonyms

H2A.X, H2A/X, H2AX

Location

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features, is associated with 1025 variant alleles and maps to 280 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000530167.1	H2AFX-001	1614	143aa	ENSP00000434024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8410	P16104	NM_002105.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375167.1	H2AFX-002	1373	143aa	ENSP00000364310.1	Nonsense mediated decay	CCDS8410	P16104	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,373 bps, Translation length: 143 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16104

CCDS

This transcript is a member of the Human CCDS set: CCDS8410

Version

ENST00000375167.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000442282 (version 1)