Transcript: ENST00000490752.1 AGAP4-005

Description

ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 [Source:HGNC Symbol;Acc:23459]

Gene Synonyms

AGAP-4, CTGLF1, Em:AC012044.1, MRIP2

Location

About this transcript

This transcript has 3 exons, is associated with 1704 variant alleles and maps to 723 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000448048.2	AGAP4-001	2439	663aa	ENSP00000392513.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7215	Q96P64	NM_133446.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492347.1	AGAP4-002	413	137aa	ENSP00000468160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ER91	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000430779.2	AGAP4-003	952	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490752.1	AGAP4-005	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495243.1	AGAP4-004	340	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 400 bps,

Version

ENST00000490752.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047803 (version 1)