Transcript: ENST00000550165.1 MCRS1-006

Description

microspherule protein 1 [Source:HGNC Symbol;Acc:6960]

Gene Synonyms

ICP22BP, INO80Q, MCRS2, MSP58, P78

Location

Chromosome 12: 49,952,146-49,961,884 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 11 domains and features, is associated with 4761 variant alleles and maps to 504 oligo probes.

Gene

This transcript is a product of gene ENSG00000187778.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000550165.1	MCRS1-006	1936	462aa	ENSP00000448056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8787	F8VP44 F8VVA6 F8W126 Q7Z372 Q96EZ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343810.4	MCRS1-001	1928	462aa	ENSP00000345358.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8787	F8VP44 F8VVA6 F8W126 Q7Z372 Q96EZ8	NM_006337.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546244.1	MCRS1-201	1662	271aa	ENSP00000444982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61118	Q7Z372	NM_001278341.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357123.4	MCRS1-002	1428	475aa	ENSP00000349640.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31795	F8W126 Q7Z372 Q96EZ8	NM_001012300.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553173.1	MCRS1-012	1037	318aa	ENSP00000447514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W126	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548596.1	MCRS1-013	894	185aa	ENSP00000449343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VVA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548334.1	MCRS1-014	876	205aa	ENSP00000450352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VP44 F8VVA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549528.1	MCRS1-015	646	144aa	ENSP00000447592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0I9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551598.1	MCRS1-007	636	173aa	ENSP00000448947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIA0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000548602.1	MCRS1-003	1666	61aa	ENSP00000447739.1	Nonsense mediated decay		F8VZC2	-	-
ENST00000548646.1	MCRS1-008	608	64aa	ENSP00000448700.1	Nonsense mediated decay		H0YI67	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547182.1	MCRS1-009	724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551625.1	MCRS1-004	2450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549000.1	MCRS1-005	1074	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552206.1	MCRS1-011	984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552596.1	MCRS1-010	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 1,936 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96EZ8

CCDS

This transcript is a member of the Human CCDS set: CCDS8787

Version

ENST00000550165.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405102 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000550165.1 MCRS1-006

Summary