Transcript: ENST00000486468.1 SESTD1-007

Description

SEC14 and spectrin domains 1 [Source:HGNC Symbol;Acc:18379]

Gene Synonyms

DKFZp434O0515, SOLO, Solo

Location

Chromosome 2: 180,027,210-180,056,593 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 12680 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSG00000187231.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000428443.3	SESTD1-001	10615	696aa	ENSP00000415332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33338	C9J4X8 C9JHW6 Q7Z6D3 Q86VW0	NM_178123.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435047.1	SESTD1-005	681	143aa	ENSP00000410286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4X8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440010.1	SESTD1-004	619	146aa	ENSP00000416164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4X8 C9JHW6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446758.1	SESTD1-003	1699	210aa	ENSP00000410632.1	Nonsense mediated decay		Q9UFF8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000335289.5	SESTD1-002	1675	106aa	ENSP00000334183.5	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426988.1	SESTD1-009	724	225aa	ENSP00000391000.1	Nonsense mediated decay		H7BZR8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000452991.1	SESTD1-006	460	93aa	ENSP00000387517.1	Nonsense mediated decay		F8WFB2	-	-
ENST00000486468.1	SESTD1-007	423	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489901.1	SESTD1-008	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 423 bps,

Version

ENST00000486468.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335922 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000486468.1 SESTD1-007

Summary