Transcript: ENST00000481739.1 RXRA-002

Description

retinoid X receptor, alpha [Source:HGNC Symbol;Acc:10477]

Gene Synonyms

NR2B1

Location

About this transcript

This transcript has 10 exons, is annotated with 27 domains and features, is associated with 57173 variant alleles and maps to 396 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000540193.1	RXRA-201	2421	365aa	ENSP00000442123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481739.1	RXRA-002	1846	462aa	ENSP00000419692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35172	B3KY83 F1D8Q5 P19793 Q6P3U7	NM_002957.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356384.4	RXRA-001	5770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484822.1	RXRA-003	5215	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,846 bps, Translation length: 462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19793

CCDS

This transcript is a member of the Human CCDS set: CCDS35172

Version

ENST00000481739.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054949 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.