Transcript: ENST00000553024.1 PPP1CC-006

Description

protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283]

Gene Synonyms

PP-1G, PP1C, PP1gamma, PPP1G

Location

Chromosome 12: 111,158,553-111,164,484 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2576 variant alleles and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000186298.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335007.5	PPP1CC-001	2559	323aa	ENSP00000335084.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9150	B4DNE3 C4TNW5 C4TNW6 P36873 Q9UPN1	NM_002710.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546933.1	PPP1CC-004	2154	332aa	ENSP00000447122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNE3 C4TNW5 C4TNW6 F8W0W8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550991.1	PPP1CC-010	1882	304aa	ENSP00000448981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 C4TNW6 F8VYE8 Q9UPN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551676.1	PPP1CC-009	1581	270aa	ENSP00000448437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 F8VR82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340766.5	PPP1CC-002	1472	337aa	ENSP00000341779.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58279	C4TNW5 C4TNW6 P36873 Q9UPN1	NM_001244974.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551582.1	PPP1CC-007	563	83aa	ENSP00000447090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1A0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550261.1	PPP1CC-005	747	54aa	ENSP00000447528.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551690.1	PPP1CC-003	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553024.1	PPP1CC-006	2797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546904.1	PPP1CC-008	1133	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,797 bps,

Version

ENST00000553024.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404664 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000553024.1 PPP1CC-006

Summary