Transcript: ENST00000399697.3 POLR1D-004

Description

polymerase (RNA) I polypeptide D, 16kDa [Source:HGNC Symbol;Acc:20422]

Gene Synonyms

AC19, MGC9850, POLR1C, RPA16, RPA9, RPAC2, RPC16, RPO1-3, TCS2

Location

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 18075 variant alleles and maps to 332 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399697.3	POLR1D-004	1945	122aa	ENSP00000382604.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9324	Q7Z776 Q9Y2S0	NM_152705.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000302979.3	POLR1D-003	1626	133aa	ENSP00000302478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9325	Q9Y2S0	NM_015972.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399696.1	POLR1D-201	690	133aa	ENSP00000382603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9325	Q9Y2S0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465887.1	POLR1D-005	1931	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489647.1	POLR1D-001	867	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472179.1	POLR1D-002	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,945 bps, Translation length: 122 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2S0

CCDS

This transcript is a member of the Human CCDS set: CCDS9324

Version

ENST00000399697.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044306 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.