Transcript: ENST00000335968.3 TARSL2-001

Description

threonyl-tRNA synthetase-like 2 [Source:HGNC Symbol;Acc:24728]

Gene Synonyms

FLJ25005

Location

About this transcript

This transcript has 19 exons, is annotated with 28 domains and features, is associated with 32093 variant alleles and maps to 667 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335968.3	TARSL2-001	3610	802aa	ENSP00000338093.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10394	A2RTX5	NM_152334.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539112.1	TARSL2-003	2774	766aa	ENSP00000439899.1	Nonsense mediated decay		B7ZLP8	-	-
ENST00000558533.1	TARSL2-004	1916	148aa	ENSP00000452740.1	Nonsense mediated decay		H0YKB9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559492.1	TARSL2-005	755	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557811.1	TARSL2-006	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560150.1	TARSL2-007	335	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,610 bps, Translation length: 802 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2RTX5

CCDS

This transcript is a member of the Human CCDS set: CCDS10394

Version

ENST00000335968.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000313619 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.