Transcript: ENST00000466861.1 SUMO3-004

Description

small ubiquitin-like modifier 3 [Source:HGNC Symbol;Acc:11124]

Gene Synonyms

SMT3A, SMT3B, SMT3H1, SUMO-3, Smt3B

Location

Chromosome 21: 46,233,425-46,238,020 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2816 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000184900.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332859.6	SUMO3-001	1807	103aa	ENSP00000330343.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33587	P55854	NM_006936.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397898.3	SUMO3-002	1779	135aa	ENSP00000380995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411651.2	SUMO3-201	831	141aa	ENSP00000409666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68220	B4DUW4	NM_001286416.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397893.3	SUMO3-005	520	147aa	ENSP00000380990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MU27	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479153.1	SUMO3-003	1736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466861.1	SUMO3-004	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 753 bps,

Version

ENST00000466861.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000206563 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000466861.1 SUMO3-004

Summary