Transcript: ENST00000527340.1 CNTN2-005

Description

contactin 2 (axonal) [Source:HGNC Symbol;Acc:2172]

Gene Synonyms

AXT, FAME5, TAG-1, TAG1, TAX, TAX1

Location

About this transcript

This transcript has 4 exons, is associated with 1415 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331830.4	CNTN2-001	8141	1040aa	ENSP00000330633.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1449	Q02246	NM_005076.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481872.2	CNTN2-002	4306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530117.1	CNTN2-003	1238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525433.1	CNTN2-007	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532366.1	CNTN2-004	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527340.1	CNTN2-005	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530594.1	CNTN2-006	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 555 bps,

Version

ENST00000527340.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386320 (version 1)