Transcript: ENST00000481685.1 LIN9-005

Description

lin-9 homolog (C. elegans) [Source:HGNC Symbol;Acc:30830]

Gene Synonyms

BARA, BARPsv, Lin-9, TGS, TGS1, TGS2

Location

Chromosome 1: 226,420,414-226,496,955 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 32241 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000183814.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328205.5	LIN9-001	3567	558aa	ENSP00000329102.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1553	B1B047 Q5TKA1	NM_173083.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366801.1	LIN9-201	3219	507aa	ENSP00000355766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TKA1	NM_001270409.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366808.1	LIN9-002	3186	613aa	ENSP00000355773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1B047 H0Y322	NM_001270410.1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460719.1	LIN9-003	2909	518aa	ENSP00000418121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4T7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481685.1	LIN9-005	1916	489aa	ENSP00000418489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5J4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359525.2	LIN9-004	686	71aa	ENSP00000352515.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1B047	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,916 bps, Translation length: 489 residues

Version

ENST00000481685.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000357627 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000481685.1 LIN9-005

Summary