Transcript: ENST00000330949.1 SOX1-001

Description

SRY (sex determining region Y)-box 1 [Source:HGNC Symbol;Acc:11189]

Location

About this transcript

This transcript has 1 exon, is annotated with 16 domains and features, is associated with 2949 variant alleles and maps to 383 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330949.1	SOX1-001	4108	391aa	ENSP00000330218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9523	O00570	NM_005986.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 4,108 bps, Translation length: 391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00570

CCDS

This transcript is a member of the Human CCDS set: CCDS9523

Version

ENST00000330949.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000045817 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.