Transcript: ENST00000487210.1 PLCB1-002

Description

phospholipase C, beta 1 (phosphoinositide-specific) [Source:HGNC Symbol;Acc:15917]

Gene Synonyms

EIEE12, KIAA0581, PI-PLC, PLC-154, PLC-I, PLC154, PLCB1A, PLCB1B

Location

Chromosome 20: 8,639,268-8,949,003 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 41 domains and features, is associated with 129648 variant alleles and maps to 585 oligo probes.

Gene

This transcript is a product of gene ENSG00000182621.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378641.3	PLCB1-005	7295	1173aa	ENSP00000367908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13103	Q9NQ66	NM_182734.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338037.6	PLCB1-003	6729	1216aa	ENSP00000338185.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13102	Q9NQ66	NM_015192.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378637.2	PLCB1-004	3854	1173aa	ENSP00000367904.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13103	Q9NQ66	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439627.1	PLCB1-007	707	196aa	ENSP00000391162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IV92	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000404098.2	PLCB1-001	697	232aa	ENSP00000384001.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AK73	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000437439.1	PLCB1-008	288	30aa	ENSP00000389911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IV91	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487210.1	PLCB1-002	4777	914aa	ENSP00000431704.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494924.1	PLCB1-006	2340	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475958.1	PLCB1-009	443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 24, Transcript length: 4,777 bps, Translation length: 914 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000487210.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077937 (version 5)

Favourite species

All species

Recent locations

Transcript: ENST00000487210.1 PLCB1-002

Summary