Transcript: ENST00000331595.4 BGN-001

Description

biglycan [Source:HGNC Symbol;Acc:1044]

Gene Synonyms

DSPG1, PG-S1, PGI, SLRR1A

Location

About this transcript

This transcript has 8 exons, is annotated with 27 domains and features, is associated with 5883 variant alleles and maps to 689 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331595.4	BGN-001	2402	368aa	ENSP00000327336.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14721	A6NLG9 B4DDQ2 P21810	NM_001711.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431891.1	BGN-002	846	238aa	ENSP00000402525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480756.1	BGN-005	2278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472615.1	BGN-004	2225	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492658.1	BGN-006	420	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,402 bps, Translation length: 368 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21810

CCDS

This transcript is a member of the Human CCDS set: CCDS14721

Version

ENST00000331595.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060981 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.