Transcript: ENST00000414487.2 SNRPE-001

Description

small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161]

Gene Synonyms

B-raf, HYPT11, SME, Sm-E

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 4609 variant alleles and maps to 440 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000414487.2	SNRPE-001	942	92aa	ENSP00000400591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30979	A6NHK2 P62304	NM_003094.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367208.1	SNRPE-004	355	52aa	ENSP00000356176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NHK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483099.1	SNRPE-002	967	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475035.1	SNRPE-005	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470492.1	SNRPE-006	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469451.1	SNRPE-003	248	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 942 bps, Translation length: 92 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62304

CCDS

This transcript is a member of the Human CCDS set: CCDS30979

Version

ENST00000414487.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000087703 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.