Transcript: ENST00000345093.4 RNF41-001

Description

ring finger protein 41 [Source:HGNC Symbol;Acc:18401]

Gene Synonyms

FLRF, NRDP1, SBBI03

Location

Chromosome 12: 56,598,285-56,615,705 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 7618 variant alleles and maps to 606 oligo probes.

Gene

This transcript is a product of gene ENSG00000181852.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000345093.4	RNF41-001	3270	317aa	ENSP00000342755.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8909	B4E353 F8VNZ6 F8VSB6 F8VSP7 F8VVY2 Q9H4P4	NM_194359.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394013.2	RNF41-002	2452	246aa	ENSP00000377581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8910	F8VNZ6 F8VVY2 Q9H4P4	NM_194358.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552656.1	RNF41-006	1193	317aa	ENSP00000447303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8909	B4E353 F8VNZ6 F8VSB6 F8VSP7 F8VVY2 Q9H4P4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549038.1	RNF41-011	890	190aa	ENSP00000446595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSP7	NM_001242826.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552244.1	RNF41-010	716	201aa	ENSP00000448187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSB6 F8VSP7 F8VVY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551711.1	RNF41-013	582	146aa	ENSP00000450164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNZ6 F8VVY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547967.1	RNF41-005	2552	130aa	ENSP00000449575.1	Nonsense mediated decay		F8VVY2	-	-
ENST00000549119.1	RNF41-009	796	61aa	ENSP00000448330.1	Nonsense mediated decay		F8VSE5	-	-
ENST00000548225.1	RNF41-003	1001	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548120.1	RNF41-008	698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550379.1	RNF41-007	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 3,270 bps, Translation length: 317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H4P4

CCDS

This transcript is a member of the Human CCDS set: CCDS8909

Version

ENST00000345093.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408525 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000345093.4 RNF41-001

Summary