Transcript: ENST00000322644.6 POLR2A-001

Description

polymerase (RNA) II (DNA directed) polypeptide A, 220kDa [Source:HGNC Symbol;Acc:9187]

Gene Synonyms

POLR2, POLRA, RPB1, RPBh1, RPO2, RPOL2, RpIILS, hRPB220, hsRPB1

Location

Chromosome 17: 7,387,685-7,417,933 forward strand.

About this transcript

This transcript has 29 exons, is annotated with 116 domains and features, is associated with 17783 variant alleles and maps to 869 oligo probes.

Gene

This transcript is a product of gene ENSG00000181222.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322644.6	POLR2A-001	6749	1970aa	ENSP00000314949.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32548	P24928	NM_000937.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572844.1	POLR2A-002	2083	566aa	ENSP00000461879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NX41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575547.1	POLR2A-006	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573603.1	POLR2A-009	648	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576553.1	POLR2A-010	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576718.1	POLR2A-007	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576952.1	POLR2A-005	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574158.1	POLR2A-011	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576114.1	POLR2A-008	245	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 6,749 bps, Translation length: 1,970 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P24928

CCDS

This transcript is a member of the Human CCDS set: CCDS32548

Version

ENST00000322644.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437967 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000322644.6 POLR2A-001

Summary