Transcript: ENST00000263035.4 DHTKD1-001

Description

dehydrogenase E1 and transketolase domain containing 1 [Source:HGNC Symbol;Acc:23537]

Gene Synonyms

AMOXAD, CMT2Q, DKFZP762M115, KIAA1630, MGC3090

Location

About this transcript

This transcript has 17 exons, is annotated with 12 domains and features, is associated with 27258 variant alleles and maps to 717 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263035.4	DHTKD1-001	5159	919aa	ENSP00000263035.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7087	Q96HY7	NM_018706.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437298.1	DHTKD1-006	933	307aa	ENSP00000388163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448829.1	DHTKD1-003	787	214aa	ENSP00000398482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000415935.1	DHTKD1-004	482	160aa	ENSP00000400625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1J3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000465617.1	DHTKD1-002	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479283.1	DHTKD1-005	318	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,159 bps, Translation length: 919 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HY7

CCDS

This transcript is a member of the Human CCDS set: CCDS7087

Version

ENST00000263035.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046777 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.