Transcript: ENST00000456208.2 LRRC3B-003

Description

leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:28105]

Gene Synonyms

LRP15

Location

Chromosome 3: 26,736,046-26,752,267 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 16 domains and features, is associated with 7611 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSG00000179796.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396641.2	LRRC3B-001	1696	259aa	ENSP00000379880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2644	C9J6A1 C9JMC7 Q96PB8	NM_052953.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417744.1	LRRC3B-002	1695	259aa	ENSP00000406370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2644	C9J6A1 C9JMC7 Q96PB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456208.2	LRRC3B-003	1551	259aa	ENSP00000394940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2644	C9J6A1 C9JMC7 Q96PB8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432040.1	LRRC3B-005	927	163aa	ENSP00000398184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6A1 C9JMC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414619.1	LRRC3B-004	489	54aa	ENSP00000389764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469437.1	LRRC3B-006	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,551 bps, Translation length: 259 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PB8

CCDS

This transcript is a member of the Human CCDS set: CCDS2644

Version

ENST00000456208.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340893 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000456208.2 LRRC3B-003

Summary