Transcript: ENST00000592268.1 RAD23A-005

Description

RAD23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:9812]

Gene Synonyms

HHR23A, HR23A, MGC111083

Location

Chromosome 19: 13,056,706-13,064,405 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 28 domains and features, is associated with 4286 variant alleles and maps to 468 oligo probes.

Gene

This transcript is a product of gene ENSG00000179262.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000586534.1	RAD23A-002	1746	363aa	ENSP00000467024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12289	B4DDJ7 K7ENJ0 P54725	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316856.3	RAD23A-001	1736	362aa	ENSP00000321365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59358	K7ENJ0 Q59EU8	NM_005053.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592268.1	RAD23A-005	1526	308aa	ENSP00000468674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59357	K7ENJ0 P54725	NM_001270363.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541222.1	RAD23A-201	1350	198aa	ENSP00000438741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DDJ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590881.1	RAD23A-008	999	150aa	ENSP00000467628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ16	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593114.1	RAD23A-004	1691	139aa	ENSP00000466968.1	Nonsense mediated decay		K7ENJ0	-	-
ENST00000591499.1	RAD23A-003	1350	142aa	ENSP00000466243.1	Nonsense mediated decay		K7ELW1 K7ENJ0	-	-
ENST00000586375.1	RAD23A-010	894	62aa	ENSP00000466226.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588826.2	RAD23A-007	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588329.1	RAD23A-006	1034	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591467.1	RAD23A-009	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,526 bps, Translation length: 308 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54725

CCDS

This transcript is a member of the Human CCDS set: CCDS59357

Version

ENST00000592268.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452753 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000592268.1 RAD23A-005

Summary