Transcript: ENST00000375772.3 MAGED1-002

Description

melanoma antigen family D, 1 [Source:HGNC Symbol;Acc:6813]

Gene Synonyms

DLXIN-1, NRAGE

Location

Chromosome X: 51,546,103-51,645,450 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 28196 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000179222.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375695.2	MAGED1-003	2875	834aa	ENSP00000364847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35279	Q9Y5V3	NM_001005333.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375722.1	MAGED1-005	2806	778aa	ENSP00000364874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14337	Q9Y5V3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326587.7	MAGED1-001	2747	778aa	ENSP00000325333.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14337	Q9Y5V3	NM_006986.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375772.3	MAGED1-002	2701	778aa	ENSP00000364927.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14337	Q9Y5V3	NM_001005332.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494718.1	MAGED1-004	5418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485420.1	MAGED1-006	2906	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473931.1	MAGED1-011	950	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470461.1	MAGED1-008	810	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482188.1	MAGED1-009	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482599.1	MAGED1-010	341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,701 bps, Translation length: 778 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5V3

CCDS

This transcript is a member of the Human CCDS set: CCDS14337

Version

ENST00000375772.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056590 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375772.3 MAGED1-002

Summary