Transcript: ENST00000485303.1 PVRL3-002

Description

poliovirus receptor-related 3 [Source:HGNC Symbol;Acc:17664]

Gene Synonyms

CD113, CDW113, CDw113, DKFZP566B0846, NECTIN-3, PPR3, PRR3, PVRR3, nectin-3

Location

Chromosome 3: 110,790,590-110,854,801 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 28890 variant alleles and maps to 478 oligo probes.

Gene

This transcript is a product of gene ENSG00000177707.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000485303.1	PVRL3-002	3664	549aa	ENSP00000418070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2957	Q9NQS3	NM_015480.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493615.1	PVRL3-003	1876	487aa	ENSP00000420579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58843	Q9NQS3	NM_001243288.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319792.3	PVRL3-001	1549	366aa	ENSP00000321514.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58842	Q9NQS3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486596.1	PVRL3-011	732	244aa	ENSP00000417572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000461477.1	PVRL3-005	586	130aa	ENSP00000418327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J795	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491525.1	PVRL3-006	564	17aa	ENSP00000418691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481766.1	PVRL3-009	530	168aa	ENSP00000420479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485506.1	PVRL3-004	314	31aa	ENSP00000419829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5G5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488016.1	PVRL3-007	829	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470618.1	PVRL3-008	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478327.1	PVRL3-010	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,664 bps, Translation length: 549 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQS3

CCDS

This transcript is a member of the Human CCDS set: CCDS2957

Version

ENST00000485303.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000354045 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000485303.1 PVRL3-002

Summary