Transcript: ENST00000534561.1 PNPLA2-005

Description

patatin-like phospholipase domain containing 2 [Source:HGNC Symbol;Acc:30802]

Gene Synonyms

1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, desnutrin, iPLA2zeta

Location

About this transcript

This transcript has 2 exons, is associated with 323 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336615.4	PNPLA2-001	2428	504aa	ENSP00000337701.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7718	Q96AD5	NM_020376.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525250.1	PNPLA2-002	2726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529255.1	PNPLA2-003	1301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531923.1	PNPLA2-007	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526083.1	PNPLA2-006	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534561.1	PNPLA2-005	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 388 bps,

Version

ENST00000534561.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382854 (version 1)