Transcript: ENST00000323274.10 TYMS-001

Description

thymidylate synthetase [Source:HGNC Symbol;Acc:12441]

Gene Synonyms

HST422, HsT422, TMS, TS, Tsase

Location

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 10098 variant alleles and maps to 524 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323274.10	TYMS-001	1662	313aa	ENSP00000315644.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11821	P04818 Q53Y97	NM_001071.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323224.7	TYMS-002	1327	279aa	ENSP00000314727.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P04818	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000323250.5	TYMS-003	693	230aa	ENSP00000314902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P04818	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581920.1	TYMS-005	886	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584122.1	TYMS-004	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579128.1	TYMS-006	925	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,662 bps, Translation length: 313 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04818

CCDS

This transcript is a member of the Human CCDS set: CCDS11821

Version

ENST00000323274.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254316 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.