Transcript: ENST00000310653.6 RAB6A-001

Description

RAB6A, member RAS oncogene family [Source:HGNC Symbol;Acc:9786]

Gene Synonyms

RAB6

Location

Chromosome 11: 73,386,683-73,472,182 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 42133 variant alleles and maps to 799 oligo probes.

Gene

This transcript is a product of gene ENSG00000175582.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310653.6	RAB6A-001	3389	208aa	ENSP00000311449.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8223	P20340 Q9UL30	NM_002869.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336083.3	RAB6A-002	3085	208aa	ENSP00000336850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8224	B7Z5Z9 C9JB90 P20340 Q9UL29	NM_198896.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541973.1	RAB6A-006	1104	201aa	ENSP00000443782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UL30	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000536566.1	RAB6A-201	1102	175aa	ENSP00000437863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58155	P20340	NM_001243719.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541588.1	RAB6A-013	758	104aa	ENSP00000445350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58156	P20340	NM_001243718.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540771.1	RAB6A-014	699	71aa	ENSP00000438842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3K7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000400470.2	RAB6A-010	522	174aa	ENSP00000383318.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB90 Q9UL29	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000545625.1	RAB6A-012	447	87aa	ENSP00000440469.1	Nonsense mediated decay		F5GX61	-	-
ENST00000537446.1	RAB6A-011	447	87aa	ENSP00000443470.1	Nonsense mediated decay		F5GX61	-	-
ENST00000541795.1	RAB6A-005	1812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,389 bps, Translation length: 208 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20340

CCDS

This transcript is a member of the Human CCDS set: CCDS8223

Version

ENST00000310653.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259240 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310653.6 RAB6A-001

Summary