Transcript: ENST00000534824.1 RIN1-006

Description

Ras and Rab interactor 1 [Source:HGNC Symbol;Acc:18749]

Location

Chromosome 11: 66,099,681-66,103,162 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 2289 variant alleles and maps to 512 oligo probes.

Gene

This transcript is a product of gene ENSG00000174791.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000311320.4	RIN1-001	2693	783aa	ENSP00000310406.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31614	Q13671	NM_004292.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530056.1	RIN1-002	2122	617aa	ENSP00000432798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DW96 E9PNR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424433.2	RIN1-201	2084	605aa	ENSP00000400560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EM96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530745.1	RIN1-004	1872	80aa	ENSP00000431185.1	Nonsense mediated decay		E9PMB8	-	-
ENST00000534824.1	RIN1-006	1834	73aa	ENSP00000431550.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524804.1	RIN1-007	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526246.1	RIN1-005	4416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528006.1	RIN1-008	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,834 bps, Translation length: 73 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000534824.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392982 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000534824.1 RIN1-006

Summary