Transcript: ENST00000309295.4 EHBP1L1-001

Description

EH domain binding protein 1-like 1 [Source:HGNC Symbol;Acc:30682]

Gene Synonyms

DKFZp762C186, TANGERIN

Location

Chromosome 11: 65,343,509-65,360,121 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 28 domains and features, is associated with 9090 variant alleles and maps to 711 oligo probes.

Gene

This transcript is a product of gene ENSG00000173442.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309295.4	EHBP1L1-001	5185	1523aa	ENSP00000312671.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44649	Q8N3D4	NM_001099409.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533237.1	EHBP1L1-007	2267	670aa	ENSP00000431996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533465.1	EHBP1L1-009	793	265aa	ENSP00000434693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000533364.1	EHBP1L1-010	769	128aa	ENSP00000435843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PSB0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529596.1	EHBP1L1-005	799	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529099.1	EHBP1L1-013	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529056.1	EHBP1L1-012	461	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531106.1	EHBP1L1-008	176	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526990.1	EHBP1L1-006	3169	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527214.1	EHBP1L1-011	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,185 bps, Translation length: 1,523 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N3D4

CCDS

This transcript is a member of the Human CCDS set: CCDS44649

Version

ENST00000309295.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390145 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000309295.4 EHBP1L1-001

Summary