Transcript: ENST00000525149.1 SYT12-006

Description

synaptotagmin XII [Source:HGNC Symbol;Acc:18381]

Gene Synonyms

SRG1, SYT11, sytXII

Location

Chromosome 11: 66,797,571-66,807,402 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5170 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000173227.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393946.2	SYT12-001	4534	421aa	ENSP00000377520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8154	E9PNM5 Q8IV01 Q8NDM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525457.1	SYT12-002	1678	421aa	ENSP00000431400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8154	E9PNM5 Q8IV01 Q8NDM9	NM_001177880.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527043.1	SYT12-003	1661	421aa	ENSP00000435316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8154	E9PNM5 Q8IV01 Q8NDM9	NM_177963.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533427.1	SYT12-005	593	98aa	ENSP00000434709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNM5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526281.1	SYT12-007	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525149.1	SYT12-006	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531392.1	SYT12-004	6028	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 519 bps,

Version

ENST00000525149.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393135 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000525149.1 SYT12-006

Summary