Transcript: ENST00000376745.4 PPP1CA-001

Description

protein phosphatase 1, catalytic subunit, alpha isozyme [Source:HGNC Symbol;Acc:9281]

Gene Synonyms

PP-1A, PP1A, PP1alpha, PPP1A

Location

Chromosome 11: 67,165,672-67,169,402 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 2255 variant alleles and maps to 361 oligo probes.

Gene

This transcript is a product of gene ENSG00000172531.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376745.4	PPP1CA-001	1476	330aa	ENSP00000365936.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8160	C0STL0 C4TNW5 C4TNW6 P62136	NM_002708.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312989.7	PPP1CA-002	1389	341aa	ENSP00000326031.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31618	C0STL0 C4TNW5 C4TNW6 P62136	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358239.4	PPP1CA-006	1054	286aa	ENSP00000350974.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8161	C0STL0 C4TNW5 C4TNW6 P62136	NM_206873.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527663.1	PPP1CA-007	765	253aa	ENSP00000431146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMD7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542876.1	PPP1CA-010	588	179aa	ENSP00000438409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H037	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546202.1	PPP1CA-011	554	169aa	ENSP00000439568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1L6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532446.1	PPP1CA-004	1465	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537694.1	PPP1CA-009	882	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529724.1	PPP1CA-005	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532279.1	PPP1CA-008	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526510.1	PPP1CA-003	1677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,476 bps, Translation length: 330 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62136

CCDS

This transcript is a member of the Human CCDS set: CCDS8160

Version

ENST00000376745.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395487 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376745.4 PPP1CA-001

Summary