Transcript: ENST00000307823.3 CARNS1-001

Description

carnosine synthase 1 [Source:HGNC Symbol;Acc:29268]

Gene Synonyms

ATPGD1, KIAA1394

Location

Chromosome 11: 67,183,149-67,193,078 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 5462 variant alleles and maps to 461 oligo probes.

Gene

This transcript is a product of gene ENSG00000172508.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445895.2	CARNS1-202	3971	950aa	ENSP00000389009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53667	F5H427	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423745.2	CARNS1-201	3967	827aa	ENSP00000401519.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44658	A5YM72	NM_001166222.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307823.3	CARNS1-001	3942	827aa	ENSP00000308268.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44658	A5YM72	NM_020811.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531040.1	CARNS1-002	2968	924aa	ENSP00000431670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK38	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524740.1	CARNS1-007	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529925.1	CARNS1-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525907.1	CARNS1-005	368	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531388.1	CARNS1-003	5065	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531958.1	CARNS1-004	2369	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 6, Transcript length: 3,942 bps, Translation length: 827 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5YM72

CCDS

This transcript is a member of the Human CCDS set: CCDS44658

Version

ENST00000307823.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395501 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000307823.3 CARNS1-001

Summary