Transcript: ENST00000581284.1 ORMDL3-006

Description

ORM1-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:16038]

Location

Chromosome 17: 38,078,351-38,080,301 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 979 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000172057.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394169.1	ORMDL3-002	2230	153aa	ENSP00000377724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11355	J3QRM9 Q8N138	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304046.2	ORMDL3-001	2111	153aa	ENSP00000304858.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11355	J3QRM9 Q8N138	NM_139280.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579695.1	ORMDL3-003	2106	153aa	ENSP00000464693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11355	J3QRM9 Q8N138	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584000.1	ORMDL3-005	572	129aa	ENSP00000464298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584220.1	ORMDL3-004	414	137aa	ENSP00000464455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N138	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581284.1	ORMDL3-006	561	102aa	ENSP00000462961.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582052.1	ORMDL3-007	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579287.1	ORMDL3-008	349	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 561 bps, Translation length: 102 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000581284.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446838 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000581284.1 ORMDL3-006

Summary