Transcript: ENST00000567698.1 SHCBP1-007

Description

SHC SH2-domain binding protein 1 [Source:HGNC Symbol;Acc:29547]

Gene Synonyms

FLJ22009, PAL

Location

Chromosome 16: 46,615,825-46,618,165 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 906 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSG00000171241.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303383.3	SHCBP1-001	3461	672aa	ENSP00000306473.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10720	Q8NEM2	NM_024745.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569702.1	SHCBP1-005	465	155aa	ENSP00000460840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564272.1	SHCBP1-003	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566016.1	SHCBP1-002	1482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565887.1	SHCBP1-004	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567698.1	SHCBP1-007	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563219.1	SHCBP1-006	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 535 bps,

Version

ENST00000567698.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430581 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000567698.1 SHCBP1-007

Summary